STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ38141.1Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. (125 aa)    
Predicted Functional Partners:
SDJ38116.1
Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family.
 
 
 0.992
SDJ19586.1
BolA protein; Belongs to the BolA/IbaG family.
 
 
 0.959
SDI84085.1
Iron-binding apoprotein IscA; Belongs to the HesB/IscA family.
 
 0.902
SDJ33213.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
 
 0.890
SDI79488.1
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
 
 
 0.846
SDJ15959.1
DnaJ like chaperone protein.
     
 0.777
SDJ54125.1
DnaJ like chaperone protein.
     
 0.777
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
  
 
 
 0.742
SDI32850.1
Hypothetical protein; Belongs to the GcvT family.
  
   
 0.667
SDJ38154.1
Acetyltransferase (GNAT) family protein.
       0.659
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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