STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ43325.1Alcohol dehydrogenase. (345 aa)    
Predicted Functional Partners:
SDI34642.1
Alcohol dehydrogenase, class IV.
  
 0.900
SDI91142.1
Alcohol dehydrogenase, class IV.
  
 0.900
SDJ08218.1
Hypothetical protein.
  
 0.900
SDJ08688.1
Alcohol dehydrogenase, class IV.
  
 0.900
SDI09253.1
Alcohol dehydrogenase GroES-like domain-containing protein.
  
 
 0.877
SDJ45781.1
Alcohol dehydrogenase.
  
 
0.875
SDI26762.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
 
  
 0.856
SDJ26376.1
Alcohol dehydrogenase GroES-like domain-containing protein.
    
 0.856
SDI52745.1
Alkane 1-monooxygenase.
     
 0.817
SDI73161.1
Alkane 1-monooxygenase.
     
 0.817
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.