STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX94926.1PFAM: outer membrane chaperone Skp (OmpH); KEGG: aeh:Mlg_1854 outer membrane chaperone Skp (OmpH); Belongs to the skp family. (176 aa)    
Predicted Functional Partners:
ACX97068.1
PFAM: OmpA/MotB domain protein; OmpA domain protein transmembrane region-containing protein; KEGG: rfr:Rfer_1882 OmpA/MotB; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
  
 
 0.995
lpxD
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
  
    0.783
ACX96900.1
KEGG: aeh:Mlg_2625 hypothetical protein.
  
     0.748
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
  
 0.730
ACX96899.1
Multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: tgr:Tgr7_0199 PAS/PAC sensor signal transduction histidine kinase.
  
     0.713
zapD
Protein of unknown function DUF1342; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.
  
     0.639
ACX95909.1
PFAM: Domain of unknown function DUF1841; KEGG: aeh:Mlg_0808 hypothetical protein.
  
     0.545
ACX94925.1
PFAM: protein of unknown function DUF188; KEGG: hha:Hhal_1913 hypothetical protein; Belongs to the UPF0178 family.
       0.527
ACX95530.1
Uncharacterized lipoprotein-like protein; KEGG: app:CAP2UW1_1373 NlpBDapX family lipoprotein.
  
  
 0.517
ACX95485.1
TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; PFAM: transferase hexapeptide repeat containing protein; KEGG: hch:HCH_04834 acetyltransferase.
  
    0.505
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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