Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACX95034.1 | ACX95035.1 | Hneap_0171 | Hneap_0172 | PFAM: Domain of unknown function DUF1791; KEGG: tbd:Tbd_1835 hypothetical protein. | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: tbd:Tbd_1836 sigma-24 (FecI); Belongs to the sigma-70 factor family. ECF subfamily. | 0.791 |
ACX95034.1 | ACX95036.1 | Hneap_0171 | Hneap_0173 | PFAM: Domain of unknown function DUF1791; KEGG: tbd:Tbd_1835 hypothetical protein. | PFAM: Domain of unknown function DUF1791; KEGG: tgr:Tgr7_2583 hypothetical protein. | 0.466 |
ACX95035.1 | ACX95034.1 | Hneap_0172 | Hneap_0171 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: tbd:Tbd_1836 sigma-24 (FecI); Belongs to the sigma-70 factor family. ECF subfamily. | PFAM: Domain of unknown function DUF1791; KEGG: tbd:Tbd_1835 hypothetical protein. | 0.791 |
ACX95035.1 | ACX95036.1 | Hneap_0172 | Hneap_0173 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: tbd:Tbd_1836 sigma-24 (FecI); Belongs to the sigma-70 factor family. ECF subfamily. | PFAM: Domain of unknown function DUF1791; KEGG: tgr:Tgr7_2583 hypothetical protein. | 0.466 |
ACX95036.1 | ACX95034.1 | Hneap_0173 | Hneap_0171 | PFAM: Domain of unknown function DUF1791; KEGG: tgr:Tgr7_2583 hypothetical protein. | PFAM: Domain of unknown function DUF1791; KEGG: tbd:Tbd_1835 hypothetical protein. | 0.466 |
ACX95036.1 | ACX95035.1 | Hneap_0173 | Hneap_0172 | PFAM: Domain of unknown function DUF1791; KEGG: tgr:Tgr7_2583 hypothetical protein. | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: tbd:Tbd_1836 sigma-24 (FecI); Belongs to the sigma-70 factor family. ECF subfamily. | 0.466 |