STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95169.1PFAM: peptidase M61 domain protein; KEGG: noc:Noc_1493 peptidase M61. (602 aa)    
Predicted Functional Partners:
coaX
Putative transcriptional acitvator, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.811
ACX95170.1
TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: vcj:VCD_001305 biotin-protein ligase/biotin operon repressor.
       0.791
ACX95168.1
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mca:MCA0081 peptidyl-prolyl cis-trans isomerase, FKBP-type.
       0.780
ACX95167.1
PFAM: Auxin Efflux Carrier; KEGG: tgr:Tgr7_2425 auxin efflux carrier.
       0.586
ACX95166.1
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: tbd:Tbd_0223 thioredoxin; Belongs to the thioredoxin family.
       0.513
ACX95165.1
PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: tgr:Tgr7_2427 peptidase S16, lon domain-containing protein.
 
     0.452
ACX94910.1
PFAM: molybdopterin binding domain; KEGG: aeh:Mlg_1211 molybdopterin binding domain-containing protein.
  
     0.439
ACX96806.1
PFAM: porin Gram-negative type; KEGG: tgr:Tgr7_2784 putative porin.
  
     0.424
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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