STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95333.1PFAM: integrase family protein; KEGG: tbd:Tbd_0943 putative integrase prophage protein; Belongs to the 'phage' integrase family. (427 aa)    
Predicted Functional Partners:
ACX95337.1
Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: she:Shewmr4_2784 phage transcriptional regulator, AlpA.
 
  
 0.759
ACX95334.1
PFAM: transposase IS4 family protein; KEGG: eba:ebA3243 IS5 family transposase.
 
     0.565
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.535
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.