STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95361.1PFAM: BolA family protein; KEGG: tcx:Tcr_0986 BolA-like protein; Belongs to the BolA/IbaG family. (73 aa)    
Predicted Functional Partners:
ACX95359.1
PFAM: cation efflux protein; KEGG: mes:Meso_4140 putative transporter.
       0.645
ACX95360.1
PFAM: protein of unknown function DUF1244; KEGG: acr:Acry_0179 hypothetical protein.
       0.645
ACX95985.1
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: tgr:Tgr7_2460 glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 
 0.597
dksA
Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.
  
    0.547
rnd
Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.
       0.545
ACX95363.1
Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.545
rpsU
TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: dno:DNO_1081 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
   
    0.485
ACX95504.1
PFAM: aminoglycoside phosphotransferase; KEGG: pag:PLES_50861 hypothetical protein.
  
     0.466
ACX96956.1
PFAM: Peptidase M23; KEGG: noc:Noc_0910 peptidase M23B.
      
 0.410
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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