STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95466.1Site-specific DNA-methyltransferase (adenine-specific); PFAM: N-6 DNA methylase; KEGG: gbm:Gbem_3570 N-6 DNA methylase. (484 aa)    
Predicted Functional Partners:
ACX95467.1
PFAM: restriction modification system DNA specificity domain; KEGG: ftn:FTN_1154 type I restriction-modification system, subunit S.
 
 
 0.999
ACX95469.1
KEGG: gbm:Gbem_3568 type III restriction protein res subunit; PFAM: EcoEI R domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase.
 
 
 0.980
ACX95468.1
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: syp:SYNPCC7002_C0005 MloB like protein.
 
    0.944
uvrB
Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
    
 
 0.538
ACX95476.1
PFAM: flagellar protein FlaG protein; KEGG: dat:HRM2_36920 FlaG.
    
   0.516
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.504
ACX95796.1
PFAM: KR domain protein; Beta-ketoacyl synthase; Alcohol dehydrogenase GroES domain protein; short-chain dehydrogenase/reductase SDR; Acyl transferase; Alcohol dehydrogenase zinc-binding domain protein; phosphopantetheine-binding; NAD-dependent epimerase/dehydratase; KEGG: npu:Npun_F3360 beta-ketoacyl synthase.
    
 
 0.444
ACX96340.1
PFAM: KR domain protein; Acyl transferase; Beta-ketoacyl synthase; Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: neu:NE1389 putative type I polyketide synthase WcbR.
    
 
 0.444
tadA
CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
       0.409
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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