STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95575.1PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: mei:Msip34_0973 transglutaminase domain protein. (668 aa)    
Predicted Functional Partners:
ACX95576.1
PFAM: protein of unknown function DUF58; KEGG: mca:MCA0467 hypothetical protein.
  
 0.996
ACX95732.1
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: tgr:Tgr7_1491 MoxR protein, putative.
 
     0.822
ACX96905.1
PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: tgr:Tgr7_0194 peptidoglycan-binding LysM.
  
     0.749
ACX96761.1
PFAM: Pilus assembly protein PilO; KEGG: tgr:Tgr7_3026 pilus assembly protein PilO.
  
     0.745
ACX96762.1
PFAM: Pilus assembly protein PilP; KEGG: tgr:Tgr7_3027 pilus assembly protein PilP.
  
     0.736
ACX96760.1
PFAM: Fimbrial assembly family protein; KEGG: xfa:XF0370 fimbrial assembly membrane protein.
  
     0.722
ACX96759.1
TIGRFAM: type IV pilus assembly protein PilM; KEGG: hch:HCH_05972 Tfp pilus assembly protein, ATPase PilM.
  
     0.710
ACX95980.1
KEGG: tgr:Tgr7_1827 type IV pilus assembly PilZ.
  
     0.703
ACX96763.1
TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: tgr:Tgr7_3028 type IV pilus secretin PilQ.
  
     0.684
ACX94887.1
KEGG: noc:Noc_2270 putative type-4 fimbrial pilin related signal peptide protein.
 
     0.666
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.