STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95581.1TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cya:CYA_2058 HAD family hydrolase. (252 aa)    
Predicted Functional Partners:
ACX95504.1
PFAM: aminoglycoside phosphotransferase; KEGG: pag:PLES_50861 hypothetical protein.
  
    0.753
tadA
CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
      0.703
ACX96653.1
PFAM: major facilitator superfamily MFS_1; nucleoside:H symporter; KEGG: hha:Hhal_1813 major facilitator transporter.
  
  
 0.641
cbbL
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.
 
     0.571
ACX95580.1
Hypothetical protein.
       0.559
cbbS
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family.
 
   
 0.559
ACX95582.1
KEGG: hch:HCH_00267 hypothetical protein.
       0.539
ACX95090.1
TIGRFAM: sucrose-phosphate synthase; PFAM: sucrose-6F-phosphate phosphohydrolase; glycosyl transferase group 1; KEGG: tgr:Tgr7_0708 sucrose-phosphate synthase.
  
  
 0.509
ACX94895.1
Ketohexokinase; PFAM: PfkB domain protein; Rieske [2Fe-2S] iron-sulphur domain; KEGG: tcx:Tcr_1488 PfkB.
 
   
 0.471
ACX95415.1
PFAM: phosphoribulokinase/uridine kinase; KEGG: tbd:Tbd_2447 phosphoribulokinase.
 
     0.469
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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