STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95675.1TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: tcx:Tcr_1414 TRAP dicarboxylate transporter-DctM subunit. (440 aa)    
Predicted Functional Partners:
ACX95676.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: tcx:Tcr_1415 tripartite ATP-independent periplasmic transporter DctQ.
 
 0.999
ACX95677.1
Extracellular solute-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
 
 0.993
ACX95674.1
Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: mms:mma_2541 gamma-glutamyltranspeptidase.
 
     0.714
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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