STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95711.1KEGG: ttu:TERTU_2027 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein. (424 aa)    
Predicted Functional Partners:
ACX95710.1
PFAM: aminotransferase class V; KEGG: cja:CJA_0577 purine catabolism protein.
 
 
  0.994
ACX95682.1
TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; KEGG: bpy:Bphyt_2328 OHCU decarboxylase.
     0.945
ACX95681.1
Urate catabolism protein; KEGG: cja:CJA_0561 polysaccharide deacetylase protein, putative, pda4B; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase.
    
  0.909
ACX95707.1
PFAM: Amidase; KEGG: cja:CJA_0574 amidase; Belongs to the amidase family.
 
     0.796
ACX95712.1
Regulator of ribonuclease activity A; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
       0.773
ACX95709.1
PFAM: protein of unknown function DUF81; KEGG: pha:PSHAa1469 hypothetical protein.
  
    0.651
ACX95706.1
TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: rpi:Rpic_2256 hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.587
argA
KEGG: tgr:Tgr7_0572 amino-acid N-acetyltransferase; TIGRFAM: amino-acid N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; aspartate/glutamate/uridylate kinase; Belongs to the acetyltransferase family. ArgA subfamily.
  
  
 0.564
ACX95690.1
KEGG: eca:ECA3500 hypothetical protein.
 
  
 0.483
ACX95704.1
KEGG: ccs:CCNA_02701 xanthine dehydrogenase large subunit; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead.
 
     0.477
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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