STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95746.1PFAM: microcompartments protein; KEGG: nwi:Nwi_1974 hypothetical protein. (213 aa)    
Predicted Functional Partners:
ACX95760.1
TIGRFAM: carboxysome peptide B; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: afr:AFE_1686 carboxysome peptide B.
 
 
 
 0.928
ACX95761.1
TIGRFAM: carboxysome peptide A; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: tbd:Tbd_2648 carboxysome protein A.
 
 
 
 0.928
csoS1B
Microcompartments protein; Involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.
 
 
   0.795
csoS1A
Microcompartments protein; Involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.
 
 
   0.788
csoS1C
Microcompartments protein; Involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.
 
 
   0.785
ACX95763.1
KEGG: tgr:Tgr7_3201 carboxysome shell protein CsoS2.
 
   
 0.773
ACX95762.1
TIGRFAM: carboxysome shell carbonic anhydrase; PFAM: Carboxysome shell carbonic anhydrase; KEGG: afe:Lferr_1386 carboxysome shell carbonic anhydrase.
 
   
 0.764
ACX95749.1
PFAM: nitrogen regulatory protein P-II; KEGG: tbd:Tbd_2652 nitrogen regulatory protein P-II.
 
     0.654
ACX95747.1
KEGG: net:Neut_0821 hypothetical protein.
       0.558
ACX96874.1
KEGG: tcx:Tcr_0103 hypothetical protein.
  
     0.544
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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