STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95747.1KEGG: net:Neut_0821 hypothetical protein. (100 aa)    
Predicted Functional Partners:
ACX95753.1
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: afr:AFE_1677 von Willebrand factor type A domain protein.
 
     0.797
ACX95748.1
PFAM: CbbQ/NirQ/NorQ domain protein; ATPase associated with various cellular activities AAA_5; KEGG: hha:Hhal_1044 CbbQ/NirQ/NorQ C-terminal domain-containing protein.
 
     0.742
ACX97082.1
KEGG: amr:AM1_0456 hypothetical protein.
  
     0.671
cbbS
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family.
 
     0.632
ACX95746.1
PFAM: microcompartments protein; KEGG: nwi:Nwi_1974 hypothetical protein.
       0.558
ACX95749.1
PFAM: nitrogen regulatory protein P-II; KEGG: tbd:Tbd_2652 nitrogen regulatory protein P-II.
       0.539
ACX95750.1
PFAM: Protein of unknown function DUF2309; KEGG: tbd:Tbd_2653 hypothetical protein; Belongs to the UPF0753 family.
       0.539
ACX95751.1
KEGG: tbd:Tbd_2654 hypothetical protein.
       0.539
ACX95752.1
PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: tbd:Tbd_2655 NADH dehydrogenase.
       0.539
cbbL
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.
 
     0.475
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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