STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95794.1KEGG: sma:SAV_606 hypothetical protein. (179 aa)    
Predicted Functional Partners:
ACX95793.1
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: sma:SAV_607 taurine catabolism dioxygenase.
  
  
 0.922
ACX95797.1
PFAM: AMP-dependent synthetase and ligase; KEGG: sma:SAV_605 acyl-CoA synthetase.
  
    0.647
ACX95795.1
PFAM: phosphopantetheine-binding; KEGG: npu:Npun_F3169 beta-ketoacyl synthase.
       0.645
ACX95796.1
PFAM: KR domain protein; Beta-ketoacyl synthase; Alcohol dehydrogenase GroES domain protein; short-chain dehydrogenase/reductase SDR; Acyl transferase; Alcohol dehydrogenase zinc-binding domain protein; phosphopantetheine-binding; NAD-dependent epimerase/dehydratase; KEGG: npu:Npun_F3360 beta-ketoacyl synthase.
       0.645
ACX95798.1
SMART: transcription factor jumonji jmjC domain protein; KEGG: bpm:BURPS1710b_2148 JmjC domain-containing protein.
       0.550
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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