STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95816.1PFAM: NLP/P60 protein; KEGG: pag:PLES_15401 putative lipoprotein. (230 aa)    
Predicted Functional Partners:
rlmL
Putative RNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.
  
    0.811
ACX95818.1
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rme:Rmet_2143 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
 
     0.541
ACX96244.1
KEGG: dar:Daro_1907 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; SMART: Exonuclease; Excinuclease ABC C subunit domain protein.
 
   
 0.535
ACX95556.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
   0.520
ACX96956.1
PFAM: Peptidase M23; KEGG: noc:Noc_0910 peptidase M23B.
 
  
 0.520
ACX95022.1
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; histidine kinase HAMP region domain protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; histidine kinase HAMP region domain protein; KEGG: azo:azo0898 putative serine/threonine protein kinase.
 
  
 0.484
ACX95403.1
PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: aeh:Mlg_1826 peptidase M23B.
  
  
 0.439
ACX96401.1
PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; MLTD_N domain protein; SMART: Peptidoglycan-binding LysM; KEGG: pau:PA14_41090 membrane-bound lytic murein transglycosylase D precursor.
  
  
 0.422
ACX96591.1
KEGG: sse:Ssed_3079 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like; SMART: Lysozyme subfamily 2.
      
 0.408
nadD
Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
    0.404
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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