STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95848.1PFAM: protein of unknown function DUF344; KEGG: app:CAP2UW1_1280 protein of unknown function DUF344. (282 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
   
 0.673
ACX95438.1
KEGG: rce:RC1_0855 hypothetical protein.
   
    0.672
ACX95850.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dba:Dbac_0623 ABC transporter related.
  
    0.666
ACX95849.1
PFAM: ABC-3 protein; KEGG: dde:Dde_2210 cation ABC transporter, permease protein.
       0.664
ACX95851.1
PFAM: periplasmic solute binding protein; KEGG: dol:Dole_0400 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
       0.664
ACX96587.1
KEGG: afr:AFE_0966 hypothetical protein.
   
    0.592
ACX96698.1
TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: tgr:Tgr7_2996 iron-sulfur cluster-binding protein.
   
    0.586
ACX96678.1
PFAM: Aldose 1-epimerase; KEGG: amr:AM1_5101 aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.
 
      0.580
ACX95721.1
KEGG: tgr:Tgr7_1237 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.488
ACX95852.1
Chromosome segregation and condensation protein, ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
       0.451
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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