STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX95926.1KEGG: tcx:Tcr_0109 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: GGDEF domain containing protein. (446 aa)    
Predicted Functional Partners:
ACX96043.1
Diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: see:SNSL254_p_0161 EAL domain-containing protein Urf2.
 
  
 0.979
ACX95259.1
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: aha:AHA_3080 metal-dependent phosphohydrolase.
 
 0.955
ACX96417.1
Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_1761 two component LuxR family transcriptional regulator.
 
      0.899
ACX95726.1
Diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: ppw:PputW619_3232 diguanylate phosphodiesterase.
 
  
 0.873
ACX96883.1
PFAM: EAL domain protein; GGDEF domain containing protein; response regulator receiver; SMART: EAL domain protein; response regulator receiver; GGDEF domain containing protein; KEGG: cyh:Cyan8802_0849 response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
 
 0.860
ACX95453.1
KEGG: tgr:Tgr7_1229 putative diguanylate phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein.
 
  
 0.817
ACX96639.1
Diguanylate cyclase/phosphodiesterase with GAF sensor; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; KEGG: wsu:WS0108 GGDEF family protein.
 
 0.812
ACX96095.1
Diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; GGDEF domain containing protein; KEGG: sde:Sde_1162 diguanylate cyclase/phosphodiesterase.
 
   0.808
ACX96012.1
Diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: mei:Msip34_2319 diguanylate phosphodiesterase.
 
    0.784
ACX95369.1
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pmy:Pmen_0404 response regulator receiver protein.
 
 
    0.698
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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