STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX96130.1TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bcm:Bcenmc03_4790 cytochrome d ubiquinol oxidase, subunit II. (348 aa)    
Predicted Functional Partners:
ACX96129.1
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bph:Bphy_5697 cytochrome bd ubiquinol oxidase subunit I.
 0.999
ACX96127.1
KEGG: afe:Lferr_1109 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
  
 0.978
ACX96669.1
KEGG: tgr:Tgr7_0684 hypothetical protein.
  
 
 0.971
ACX96128.1
KEGG: ppd:Ppro_3547 ABC transporter related; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.967
ACX97171.1
TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; succinate dehydrogenase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: nmu:Nmul_A0861 succinate dehydrogenase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
     
 0.647
ACX97170.1
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: mmb:Mmol_0760 succinate dehydrogenase and fumarate reductase iron-sulfur protein.
     
 0.601
ACX97173.1
TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: eba:ebD20 succinate dehydrogenase cytochrome b-556 subunit.
     
 0.567
ACX97026.1
PFAM: Rubredoxin-type Fe(Cys)4 protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aeh:Mlg_0757 rubredoxin-type Fe(Cys)4 protein; Belongs to the FAD-dependent oxidoreductase family.
  
  
 0.559
nuoB
NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
     
 0.526
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
    
   0.516
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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