STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX96242.1PFAM: Protein of unknown function DUF2237; KEGG: sru:SRU_2110 hypothetical protein. (179 aa)    
Predicted Functional Partners:
ACX96243.1
PFAM: glutathione peroxidase; KEGG: cti:RALTA_A0026 putative glutathione peroxydase; Belongs to the glutathione peroxidase family.
       0.783
ACX96245.1
KEGG: mei:Msip34_1017 cryptochrome, DASH family; TIGRFAM: cryptochrome, DASH family; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein.
 
     0.600
ACX96244.1
KEGG: dar:Daro_1907 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; SMART: Exonuclease; Excinuclease ABC C subunit domain protein.
       0.468
ACX96246.1
PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; KEGG: rce:RC1_2526 hypothetical protein.
       0.467
ACX96247.1
PFAM: MltA-interacting MipA family protein; KEGG: nar:Saro_3115 MltA-interacting MipA.
       0.467
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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