STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX96354.1PFAM: YdjC family protein; KEGG: mei:Msip34_1280 YdjC family protein. (266 aa)    
Predicted Functional Partners:
ACX96356.1
PFAM: GtrA family protein; KEGG: mms:mma_2833 hypothetical protein.
 
     0.787
ACX96355.1
PFAM: glycosyl transferase family 39; KEGG: dac:Daci_2190 glycosyl transferase family protein.
 
  
 0.676
ACX96357.1
PFAM: glycosyl transferase family 2; KEGG: bav:BAV2928 bactoprenol glucosyl transferase.
 
    0.562
ACX96352.1
PFAM: Stringent starvation protein B; KEGG: ppf:Pput_4403 ClpXP protease specificity-enhancing factor.
       0.466
ACX96353.1
PFAM: Glutathione S-transferase domain; KEGG: eic:NT01EI_0595 hypothetical protein.
       0.466
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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