STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX96427.1TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor; KEGG: mfa:Mfla_1775 twin-arginine translocation pathway signal. (414 aa)    
Predicted Functional Partners:
ACX96425.1
TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: mei:Msip34_0699 UreA ABC transporter, permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
ACX96426.1
TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: sde:Sde_2974 putative branched-chain amino acid transport system permease protein.
 
 
 0.995
ACX96423.1
KEGG: sde:Sde_2971 branched-chain amino acid ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.992
ACX96424.1
TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: mei:Msip34_0700 UreA ABC transporter, ATP-binding protein UrtD.
 
  
 0.989
ACX95937.1
TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: cja:CJA_1239 possible permease of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.983
ACX95938.1
TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: cja:CJA_1240 branched-chain amino acid transport system / permease component domain protein.
 
 
 0.981
ACX95935.1
Urea ABC transporter, ATP-binding protein UrtE; KEGG: cja:CJA_1237 putative branched-chain amino acid transport protein (ABC superfamily, ATP_bind); TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.963
ACX95936.1
KEGG: cja:CJA_1238 branched-chain amino acid ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.954
ACX95939.1
TIGRFAM: urea ABC transporter, urea binding protein; KEGG: cja:CJA_1241 ABC transporter, substrate-binding protein.
  
  
 
0.914
ACX96089.1
Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: aeh:Mlg_1309 sigma-54 dependent trancsriptional regulator.
 
      0.829
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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