STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX96442.1TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: aav:Aave_0395 TrbL/VirB6 plasmid conjugal transfer protein. (493 aa)    
Predicted Functional Partners:
ACX96444.1
TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: avi:Avi_9263 P-type conjugative transfer protein TrbJ.
 
  
 0.993
ACX96445.1
PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; KEGG: mei:Msip34_2905 CagE TrbE VirB component of type IV transporter system.
 
  
 0.990
ACX96447.1
PFAM: Conjugal transfer protein TrbC; KEGG: avi:Avi_9659 conjugal transfer protein.
 
  
 0.987
ACX96450.1
TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: dps:DPPB12 conjugal transfer protein TrbB.
 
  
 0.982
ACX96493.1
PFAM: conjugation TrbI family protein; KEGG: avi:Avi_9647 conjugal transfer protein.
 
  
 0.981
ACX96491.1
PFAM: Conjugal transfer protein; KEGG: app:CAP2UW1_4728 hypothetical protein.
 
  
 0.979
ACX96492.1
TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: eba:p2B6 conjugal transfer protein TrbG.
 
  
 0.979
ACX96446.1
PFAM: Conjugal transfer TrbD family protein; KEGG: avi:Avi_9658 conjugal transfer protein.
    
 0.955
ACX96441.1
PFAM: Peptidase S26, conserved region; KEGG: avi:Avi_9596 conjugative transfer signal peptidase TraF.
 
   
 0.887
ACX96475.1
PFAM: TRAG family protein; KEGG: eba:p2B19 conjugal transfer coupling protein TraG.
 
   
 0.803
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.