STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX96489.1PFAM: GCN5-related N-acetyltransferase; KEGG: cte:CT1841 acetyltransferase. (159 aa)    
Predicted Functional Partners:
ACX96488.1
PFAM: transglutaminase domain protein; KEGG: dol:Dole_0446 Cro-like protein.
       0.701
ACX96449.1
PFAM: Protein of unknown function DUF1778; KEGG: eba:ebD48 hypothetical protein.
   
   0.595
ACX96490.1
KEGG: mmw:Mmwyl1_0491 hypothetical protein.
       0.536
ACX96487.1
KEGG: aci:ACIAD3456 hypothetical protein.
       0.503
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.