STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX96490.1KEGG: mmw:Mmwyl1_0491 hypothetical protein. (112 aa)    
Predicted Functional Partners:
ACX96489.1
PFAM: GCN5-related N-acetyltransferase; KEGG: cte:CT1841 acetyltransferase.
       0.536
ACX96491.1
PFAM: Conjugal transfer protein; KEGG: app:CAP2UW1_4728 hypothetical protein.
       0.497
ACX96488.1
PFAM: transglutaminase domain protein; KEGG: dol:Dole_0446 Cro-like protein.
       0.491
ACX96492.1
TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: eba:p2B6 conjugal transfer protein TrbG.
       0.477
ACX96493.1
PFAM: conjugation TrbI family protein; KEGG: avi:Avi_9647 conjugal transfer protein.
       0.477
ACX96494.1
Hypothetical protein.
       0.477
ACX96495.1
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mei:Msip34_2897 cobyrinic acid ac-diamide synthase.
       0.477
ACX96496.1
KEGG: mei:Msip34_2896 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the ParB family.
       0.477
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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