STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX96643.1KEGG: tgr:Tgr7_0888 hypothetical protein. (237 aa)    
Predicted Functional Partners:
ACX96697.1
PFAM: FixH family protein; KEGG: tgr:Tgr7_2995 hypothetical protein.
  
     0.769
ACX95491.1
KEGG: mms:mma_0442 hypothetical protein.
  
     0.635
ACX95407.1
PFAM: methyltransferase small; KEGG: vok:COSY_0362 hypothetical protein.
  
     0.605
ACX95864.1
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: tcx:Tcr_1668 rhodanese-like protein.
  
     0.565
ACX95588.1
KEGG: tcx:Tcr_0523 hypothetical protein.
  
     0.519
ACX96642.1
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: hch:HCH_00100 sulfurtransferase.
       0.509
ACX96695.1
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: tgr:Tgr7_2686 putative transcriptional regulator, Crp/Fnr family.
  
     0.482
ACX96235.1
PFAM: Domain of unknown function DUF1840; KEGG: net:Neut_0486 hypothetical protein.
  
     0.448
ACX95978.1
PFAM: protein of unknown function DUF336; KEGG: tgr:Tgr7_2753 hypothetical protein.
  
     0.447
ACX95982.1
PFAM: Domain of unknown function DUF1791; KEGG: tcx:Tcr_0547 hypothetical protein.
  
     0.445
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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