STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX96760.1PFAM: Fimbrial assembly family protein; KEGG: xfa:XF0370 fimbrial assembly membrane protein. (196 aa)    
Predicted Functional Partners:
ACX96759.1
TIGRFAM: type IV pilus assembly protein PilM; KEGG: hch:HCH_05972 Tfp pilus assembly protein, ATPase PilM.
 
 
 0.999
ACX96761.1
PFAM: Pilus assembly protein PilO; KEGG: tgr:Tgr7_3026 pilus assembly protein PilO.
 
 
 0.998
ACX96762.1
PFAM: Pilus assembly protein PilP; KEGG: tgr:Tgr7_3027 pilus assembly protein PilP.
 
 
 0.998
ACX96763.1
TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: tgr:Tgr7_3028 type IV pilus secretin PilQ.
 
 
 0.997
ACX96905.1
PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: tgr:Tgr7_0194 peptidoglycan-binding LysM.
  
 
   0.916
ACX96537.1
TIGRFAM: FimV N-terminal domain; SMART: Peptidoglycan-binding LysM; KEGG: pap:PSPA7_1790 motility protein FimV.
  
    0.818
ACX94886.1
KEGG: xac:XAC2664 PilE protein.
 
  
 0.816
ACX97008.1
KEGG: aeh:Mlg_1250 type IV pilus biogenesis/stability protein PilW; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat.
  
   
 0.806
ACX95980.1
KEGG: tgr:Tgr7_1827 type IV pilus assembly PilZ.
  
   
 0.800
ACX94883.1
KEGG: xac:XAC2667 hypothetical protein.
 
   
 0.790
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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