STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX96982.1PFAM: Endonuclease/exonuclease/phosphatase; KEGG: tgr:Tgr7_0093 endonuclease/exonuclease/phosphatase. (286 aa)    
Predicted Functional Partners:
ACX96981.1
KEGG: tgr:Tgr7_0094 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein.
  
    0.774
ACX96983.1
PFAM: DSBA oxidoreductase; KEGG: cti:RALTA_A0104 periplasmic protein disulfide isomerase I.
 
     0.773
ACX96031.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.724
ACX95492.1
KEGG: aeh:Mlg_2479 amino acid-binding ACT domain-containing protein.
  
     0.696
ACX96757.1
KEGG: hha:Hhal_2252 hypothetical protein.
  
     0.612
ACX95527.1
PFAM: LppC family lipoprotein; KEGG: tgr:Tgr7_0757 LppC family lipoprotein.
  
     0.490
ACX96984.1
TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: tcx:Tcr_0049 cytochrome c assembly protein.
       0.457
ACX96985.1
PFAM: ResB family protein; KEGG: tgr:Tgr7_0090 ResB family protein.
       0.439
ACX95502.1
SMART: Tetratricopeptide repeat; KEGG: psp:PSPPH_0869 hypothetical protein.
  
     0.419
ACX95740.1
Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.416
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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