STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX97102.1Hypothetical protein; KEGG: mms:mma_3066 disulfide isomerase/thiol-disulfide oxidase. (413 aa)    
Predicted Functional Partners:
ACX97101.1
PFAM: Ankyrin; SMART: Ankyrin; KEGG: dze:Dd1591_2821 ankyrin.
 
    
0.815
dsbD
Cytochrome c biogenesis protein transmembrane region; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.
  
 
 0.559
ACX97103.1
KEGG: mxa:MXAN_5156 hypothetical protein.
       0.488
ACX97104.1
PFAM: TadE family protein; KEGG: bxe:Bxe_B2925 hypothetical protein.
       0.471
ACX95389.1
TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA; KEGG: mca:MCA1228 TolA protein, putative.
  
    0.448
ACX96976.1
KEGG: tgr:Tgr7_0030 hypothetical protein.
  
 
 0.416
ACX95785.1
TIGRFAM: conjugative relaxase domain protein; PFAM: TrwC relaxase; KEGG: acp:A2cp1_1110 conjugative relaxase domain protein.
  
     0.400
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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