STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX97124.1KEGG: rca:Rcas_4159 TadE family protein. (291 aa)    
Predicted Functional Partners:
ACX97123.1
KEGG: dia:Dtpsy_2119 hypothetical protein.
       0.791
ACX97122.1
Hypothetical protein.
       0.773
ACX97125.1
Hypothetical protein.
       0.773
ACX97126.1
Hypothetical protein.
       0.741
ACX97121.1
TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: swd:Swoo_0750 Flp pilus assembly protein CpaB.
       0.733
ACX97120.1
PFAM: type II and III secretion system protein; KEGG: reh:H16_A0982 flp pilus assembly protein secretin CpaC; Belongs to the bacterial secretin family.
       0.673
ACX97116.1
PFAM: protein of unknown function DUF192; KEGG: saz:Sama_0711 hypothetical protein.
       0.647
ACX97118.1
PFAM: Type II secretion system F domain; KEGG: vei:Veis_0248 type II secretion system protein.
       0.647
ACX97117.1
PFAM: Type II secretion system F domain; KEGG: saz:Sama_0710 putative type II secretion system protein F.
       0.639
ACX97115.1
Hypothetical protein; KEGG: slo:Shew_0640 TPR repeat-containing protein.
       0.636
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.