STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX97190.1Gamma-glutamyl-gamma-aminobutyrate hydrolase; PFAM: peptidase C26; KEGG: pfo:Pfl01_2121 peptidase C26. (255 aa)    
Predicted Functional Partners:
ACX97189.1
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: mpt:Mpe_A1901 L-glutamine synthetase.
 
  
 0.879
ACX97192.1
PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A1899 oxidoreductase.
 
  
 0.785
ACX97188.1
PFAM: aminotransferase class-III; KEGG: mpt:Mpe_A1902 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.752
ACX97175.1
Transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bja:bll2220 aldehyde dehydrogenase-like protein.
 
  
 0.680
ACX97181.1
PFAM: Aldehyde Dehydrogenase; KEGG: rfr:Rfer_0356 aldehyde dehydrogenase.
  
 
  0.593
ACX97186.1
Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
     0.554
ACX97191.1
Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: pna:Pnap_2866 GntR family transcriptional regulator.
  
    0.505
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
   
 0.465
ACX97179.1
TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: mpt:Mpe_A1911 L-glutamine synthetase.
  
  
 0.431
ACX96262.1
TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: mmb:Mmol_0643 DNA internalization-related competence protein ComEC/Rec2.
     
 0.427
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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