STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX97199.1PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: rpi:Rpic_0797 transcriptional regulator, AsnC family. (166 aa)    
Predicted Functional Partners:
ACX97098.1
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: tgr:Tgr7_3033 glutamate synthase (ferredoxin).
     
 0.605
dadA
D-amino-acid dehydrogenase; Oxidative deamination of D-amino acids.
       0.517
ACX97200.1
KEGG: rru:Rru_A1229 hypothetical protein.
       0.503
ACX97196.1
TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: lsp:Bsph_0067 hypothetical protein.
  
    0.488
ACX97197.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.488
ACX96350.1
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: tgr:Tgr7_2004 DNA translocase FtsK.
    
 0.406
Your Current Organism:
Halothiobacillus neapolitanus
NCBI taxonomy Id: 555778
Other names: H. neapolitanus c2, Halothiobacillus neapolitanus ATCC 23641, Halothiobacillus neapolitanus c2, Halothiobacillus neapolitanus str. c2, Halothiobacillus neapolitanus strain c2
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