STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ81632.1nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs. (490 aa)    
Predicted Functional Partners:
SDZ81649.1
IMP dehydrogenase.
 
    0.739
SDZ81487.1
NADH-quinone oxidoreductase subunit C/D.
       0.720
SDZ81518.1
NADH-quinone oxidoreductase subunit I.
    
  0.703
SDZ81535.1
NADH dehydrogenase subunit J.
       0.669
SDZ81552.1
NADH-quinone oxidoreductase subunit J.
       0.669
SDZ81566.1
NADH-quinone oxidoreductase subunit K.
       0.669
SDZ81583.1
NADH-quinone oxidoreductase subunit L.
       0.669
SDZ81600.1
NADH-quinone oxidoreductase subunit M.
       0.669
SDZ81620.1
NADH-quinone oxidoreductase subunit N.
       0.669
SDZ81454.1
NADH-quinone oxidoreductase subunit A.
       0.557
Your Current Organism:
Haloplanus vescus
NCBI taxonomy Id: 555874
Other names: CGMCC 1.8712, H. vescus, Haloplanus sp. RO5-8, Haloplanus vescus Cui et al. 2010, JCM 16055, strain RO5-8
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