STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA24129.1NitT/TauT family transport system substrate-binding protein. (335 aa)    
Predicted Functional Partners:
SEA24110.1
NitT/TauT family transport system permease protein.
 
 
  0.994
SEA24099.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.993
SEA05361.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.698
SEA17746.1
Uncharacterized membrane protein YfcA.
  
    0.648
SEA05397.1
NitT/TauT family transport system permease protein.
 
 
  0.642
SEA05384.1
NitT/TauT family transport system permease protein.
 
 
  0.638
SEA21602.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
 
  0.612
SEA11678.1
NAD(P)H-dependent FMN reductase.
  
 
  0.584
mer
5,10-methylenetetrahydromethanopterin reductase; Catalyzes the oxidation of methyl-H(4)MPT to methylene- H(4)MPT.
  
 
 0.560
SEA18079.1
PAS domain-containing protein.
  
  
  0.504
Your Current Organism:
Haloplanus vescus
NCBI taxonomy Id: 555874
Other names: CGMCC 1.8712, H. vescus, Haloplanus sp. RO5-8, Haloplanus vescus Cui et al. 2010, JCM 16055, strain RO5-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.