STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpFV/A-type H+-transporting ATPase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane. (109 aa)    
Predicted Functional Partners:
SFR34484.1
V/A-type H+-transporting ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
SFR34490.1
V/A-type H+-transporting ATPase subunit K.
 
 0.999
atpE
V/A-type H+-transporting ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpC
V/A-type H+-transporting ATPase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpA
V/A-type H+-transporting ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
  
 0.999
atpB
V/A-type H+-transporting ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
  
 0.999
atpD
V/A-type H+-transporting ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
SFR34478.1
V/A-type H+-transporting ATPase subunit G/H.
  
 0.938
SFR32465.1
Hypothetical protein.
  
 
  0.875
SFR54629.1
Signal peptidase, endoplasmic reticulum-type.
  
  
  0.847
Your Current Organism:
Halogeometricum limi
NCBI taxonomy Id: 555875
Other names: CGMCC 1.8711, H. limi, Halobacteriaceae archaeon RO1-6, Halogeometricum limi (Cui et al. 2010) Qiu et al. 2013, Halosarcina limi, Halosarcina limi Cui et al. 2010, JCM 16054, strain RO1-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.