node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR34862.1 | rpl10 | SAMN04488124_0528 | SAMN04488124_2641 | Ribonuclease R. | Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.638 |
SFR34862.1 | rpl22 | SAMN04488124_0528 | SAMN04488124_2266 | Ribonuclease R. | Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.659 |
SFR34862.1 | rpl23 | SAMN04488124_0528 | SAMN04488124_2269 | Ribonuclease R. | Large subunit ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.636 |
SFR34862.1 | rpl24 | SAMN04488124_0528 | SAMN04488124_2260 | Ribonuclease R. | Large subunit ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit. | 0.655 |
SFR34862.1 | rpl32e | SAMN04488124_0528 | SAMN04488124_2254 | Ribonuclease R. | Large subunit ribosomal protein L32e; Belongs to the eukaryotic ribosomal protein eL32 family. | 0.622 |
SFR34862.1 | rpl5 | SAMN04488124_0528 | SAMN04488124_2258 | Ribonuclease R. | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.648 |
SFR34862.1 | rps15 | SAMN04488124_0528 | SAMN04488124_1408 | Ribonuclease R. | SSU ribosomal protein S15P. | 0.641 |
SFR34862.1 | rps9 | SAMN04488124_0528 | SAMN04488124_2619 | Ribonuclease R. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.733 |
SFR34862.1 | rsmA | SAMN04488124_0528 | SAMN04488124_2653 | Ribonuclease R. | 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily. | 0.759 |
SFR34862.1 | tmcA | SAMN04488124_0528 | SAMN04488124_2666 | Ribonuclease R. | tRNA(Met) cytidine acetyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.669 |
rpl10 | SFR34862.1 | SAMN04488124_2641 | SAMN04488124_0528 | Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribonuclease R. | 0.638 |
rpl10 | rpl22 | SAMN04488124_2641 | SAMN04488124_2266 | Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
rpl10 | rpl23 | SAMN04488124_2641 | SAMN04488124_2269 | Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Large subunit ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.999 |
rpl10 | rpl24 | SAMN04488124_2641 | SAMN04488124_2260 | Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Large subunit ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit. | 0.999 |
rpl10 | rpl32e | SAMN04488124_2641 | SAMN04488124_2254 | Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Large subunit ribosomal protein L32e; Belongs to the eukaryotic ribosomal protein eL32 family. | 0.999 |
rpl10 | rpl5 | SAMN04488124_2641 | SAMN04488124_2258 | Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.999 |
rpl10 | rps15 | SAMN04488124_2641 | SAMN04488124_1408 | Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | SSU ribosomal protein S15P. | 0.999 |
rpl10 | rps9 | SAMN04488124_2641 | SAMN04488124_2619 | Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rpl10 | rsmA | SAMN04488124_2641 | SAMN04488124_2653 | Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily. | 0.655 |
rpl10 | tmcA | SAMN04488124_2641 | SAMN04488124_2666 | Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | tRNA(Met) cytidine acetyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.620 |