Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR36278.1 | SFR36286.1 | SAMN04488124_0748 | SAMN04488124_0749 | Hypothetical protein. | Trehalase. | 0.544 |
SFR36278.1 | SFR36293.1 | SAMN04488124_0748 | SAMN04488124_0750 | Hypothetical protein. | cob(I)alamin adenosyltransferase. | 0.454 |
SFR36278.1 | cobQ | SAMN04488124_0748 | SAMN04488124_0751 | Hypothetical protein. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.454 |
SFR36286.1 | SFR36278.1 | SAMN04488124_0749 | SAMN04488124_0748 | Trehalase. | Hypothetical protein. | 0.544 |
SFR36286.1 | SFR36293.1 | SAMN04488124_0749 | SAMN04488124_0750 | Trehalase. | cob(I)alamin adenosyltransferase. | 0.634 |
SFR36286.1 | cobQ | SAMN04488124_0749 | SAMN04488124_0751 | Trehalase. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.634 |
SFR36293.1 | SFR36278.1 | SAMN04488124_0750 | SAMN04488124_0748 | cob(I)alamin adenosyltransferase. | Hypothetical protein. | 0.454 |
SFR36293.1 | SFR36286.1 | SAMN04488124_0750 | SAMN04488124_0749 | cob(I)alamin adenosyltransferase. | Trehalase. | 0.634 |
SFR36293.1 | cobQ | SAMN04488124_0750 | SAMN04488124_0751 | cob(I)alamin adenosyltransferase. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.994 |
cobQ | SFR36278.1 | SAMN04488124_0751 | SAMN04488124_0748 | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | Hypothetical protein. | 0.454 |
cobQ | SFR36286.1 | SAMN04488124_0751 | SAMN04488124_0749 | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | Trehalase. | 0.634 |
cobQ | SFR36293.1 | SAMN04488124_0751 | SAMN04488124_0750 | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | cob(I)alamin adenosyltransferase. | 0.994 |