STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR43203.1Archaetidylinositol phosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (200 aa)    
Predicted Functional Partners:
SFR68606.1
Myo-inositol-1-phosphate synthase.
 
  
 0.829
hisC
Histidinol-phosphate aminotransferase.
  
  
 0.804
SFR44557.1
Archaetidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.783
SFR43216.1
Adenylate kinase; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Belongs to the adenylate kinase family. AK6 subfamily.
     
 0.768
carS
CDP-diglyceride synthetase; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
 
 
 0.744
SFR33305.1
Phosphatidylserine decarboxylase.
   
 0.736
SFR45595.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
 
  
 0.721
SFR43196.1
Transcriptional regulator, XRE family.
 
    0.710
SFR44230.1
Glycerophosphoryl diester phosphodiesterase.
   
 0.689
SFR31941.1
Phosphoserine phosphatase.
    
 0.586
Your Current Organism:
Halogeometricum limi
NCBI taxonomy Id: 555875
Other names: CGMCC 1.8711, H. limi, Halobacteriaceae archaeon RO1-6, Halogeometricum limi (Cui et al. 2010) Qiu et al. 2013, Halosarcina limi, Halosarcina limi Cui et al. 2010, JCM 16054, strain RO1-6
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