Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR54193.1 | SFR54204.1 | SAMN04488124_2280 | SAMN04488124_2281 | Membrane protein. | Uncharacterized protein, MTH1187 family. | 0.563 |
SFR54193.1 | SFR54226.1 | SAMN04488124_2280 | SAMN04488124_2283 | Membrane protein. | Hypothetical protein. | 0.433 |
SFR54193.1 | mch | SAMN04488124_2280 | SAMN04488124_2282 | Membrane protein. | Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT. | 0.433 |
SFR54204.1 | SFR54193.1 | SAMN04488124_2281 | SAMN04488124_2280 | Uncharacterized protein, MTH1187 family. | Membrane protein. | 0.563 |
SFR54204.1 | SFR54226.1 | SAMN04488124_2281 | SAMN04488124_2283 | Uncharacterized protein, MTH1187 family. | Hypothetical protein. | 0.641 |
SFR54204.1 | mch | SAMN04488124_2281 | SAMN04488124_2282 | Uncharacterized protein, MTH1187 family. | Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT. | 0.643 |
SFR54226.1 | SFR54193.1 | SAMN04488124_2283 | SAMN04488124_2280 | Hypothetical protein. | Membrane protein. | 0.433 |
SFR54226.1 | SFR54204.1 | SAMN04488124_2283 | SAMN04488124_2281 | Hypothetical protein. | Uncharacterized protein, MTH1187 family. | 0.641 |
SFR54226.1 | mch | SAMN04488124_2283 | SAMN04488124_2282 | Hypothetical protein. | Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT. | 0.801 |
mch | SFR54193.1 | SAMN04488124_2282 | SAMN04488124_2280 | Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT. | Membrane protein. | 0.433 |
mch | SFR54204.1 | SAMN04488124_2282 | SAMN04488124_2281 | Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT. | Uncharacterized protein, MTH1187 family. | 0.643 |
mch | SFR54226.1 | SAMN04488124_2282 | SAMN04488124_2283 | Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT. | Hypothetical protein. | 0.801 |