STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEO25503.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. (429 aa)    
Predicted Functional Partners:
EEO25504.1
Putative transcriptional regulatory protein RprY.
 
 0.975
EEO25490.1
Response regulator receiver domain protein.
  
  0.909
EEO26433.1
Putative response regulator ArlR.
  
  0.906
EEO26328.1
Putative sensory transduction protein RegX3.
  
  0.902
EEO26687.1
Response regulator receiver domain protein.
 
  0.897
cheY
Chemotaxis protein CheY.
  
  0.887
EEO25221.1
Histidine kinase A domain protein; Truncated CDS.
   
 0.884
EEO25920.1
Response regulator receiver domain protein.
 
 
 0.880
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.854
EEO25532.1
Response regulator receiver domain protein.
  
 
 0.838
Your Current Organism:
Helicobacter winghamensis
NCBI taxonomy Id: 556267
Other names: H. winghamensis ATCC BAA-430, Helicobacter winghamensis ATCC BAA-430, Helicobacter winghamensis str. ATCC BAA-430, Helicobacter winghamensis strain ATCC BAA-430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.