STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEO26242.1Aminotransferase, class I/II. (380 aa)    
Predicted Functional Partners:
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
  
 0.835
EEO26243.1
Putative DEAD-box ATP-dependent RNA helicase CshA.
   
   0.831
mutS2
Recombination and DNA strand exchange inhibitor protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.826
EEO26240.1
Hypothetical protein.
       0.823
EEO26245.1
Acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.681
EEO26246.1
Hypothetical protein.
       0.662
EEO26244.1
Hypothetical protein.
       0.624
EEO26237.1
Radical SAM domain protein.
       0.580
EEO26238.1
Hypothetical protein.
       0.580
EEO26473.1
Homoserine dehydrogenase.
 
 
 0.516
Your Current Organism:
Helicobacter winghamensis
NCBI taxonomy Id: 556267
Other names: H. winghamensis ATCC BAA-430, Helicobacter winghamensis ATCC BAA-430, Helicobacter winghamensis str. ATCC BAA-430, Helicobacter winghamensis strain ATCC BAA-430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.