STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oorB2-oxoglutarate-acceptor oxidoreductase subunit OorB. (277 aa)    
Predicted Functional Partners:
oorC
2-oxoglutarate-acceptor oxidoreductase subunit OorC.
 
 0.999
oorA
2-oxoglutarate-acceptor oxidoreductase subunit OorA.
 
 0.999
porA
Pyruvate flavodoxin oxidoreductase subunit alpha.
 
 0.996
porC
Pyruvate flavodoxin oxidoreductase subunit gamma.
  
 0.994
porD
Pyruvate flavodoxin oxidoreductase subunit delta.
  
 0.986
oorD
2-oxoglutarate-acceptor oxidoreductase subunit OorD.
 
 
 0.978
EEO26585.1
Isocitrate dehydrogenase, NADP-dependent; Belongs to the monomeric-type IDH family.
  
 
  0.938
EEO26626.1
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
 
 0.903
oadA
Oxaloacetate decarboxylase alpha subunit.
   
 
 0.901
pta
Phosphate acetyltransferase.
   
 0.880
Your Current Organism:
Helicobacter winghamensis
NCBI taxonomy Id: 556267
Other names: H. winghamensis ATCC BAA-430, Helicobacter winghamensis ATCC BAA-430, Helicobacter winghamensis str. ATCC BAA-430, Helicobacter winghamensis strain ATCC BAA-430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.