Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
raiA | rplI | HWAG_01581 | HWAG_01095 | Ribosomal subunit interface protein. | Ribosomal protein L9; Binds to the 23S rRNA. | 0.925 |
raiA | rplO | HWAG_01581 | HWAG_00155 | Ribosomal subunit interface protein. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.924 |
raiA | rpmA | HWAG_01581 | HWAG_00911 | Ribosomal subunit interface protein. | Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.930 |
raiA | rpmC | HWAG_01581 | HWAG_00165 | Ribosomal subunit interface protein. | Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.926 |
raiA | rpmF | HWAG_01581 | HWAG_00394 | Ribosomal subunit interface protein. | Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.930 |
raiA | rpmH | HWAG_01581 | HWAG_00044 | Ribosomal subunit interface protein. | Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.928 |
raiA | rpsE | HWAG_01581 | HWAG_00156 | Ribosomal subunit interface protein. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.924 |
raiA | rpsI | HWAG_01581 | HWAG_00593 | Ribosomal subunit interface protein. | Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.928 |
raiA | rpsP | HWAG_01581 | HWAG_00564 | Ribosomal subunit interface protein. | Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.924 |
raiA | rpsU | HWAG_01581 | HWAG_01455 | Ribosomal subunit interface protein. | Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.936 |
rplI | raiA | HWAG_01095 | HWAG_01581 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal subunit interface protein. | 0.925 |
rplI | rplO | HWAG_01095 | HWAG_00155 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.990 |
rplI | rpmA | HWAG_01095 | HWAG_00911 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.989 |
rplI | rpmC | HWAG_01095 | HWAG_00165 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.989 |
rplI | rpmF | HWAG_01095 | HWAG_00394 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.986 |
rplI | rpmH | HWAG_01095 | HWAG_00044 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.950 |
rplI | rpsE | HWAG_01095 | HWAG_00156 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.989 |
rplI | rpsI | HWAG_01095 | HWAG_00593 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.990 |
rplI | rpsP | HWAG_01095 | HWAG_00564 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.990 |
rplI | rpsU | HWAG_01095 | HWAG_01455 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.970 |
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