STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHATR_13445Predicted protein. (164 aa)    
Predicted Functional Partners:
B7FWX8_PHATC
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 
 0.920
B7G4V2_PHATC
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 
 0.911
GluRS_1
Glutamate-trna ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.883
B7FWX7_PHATC
Predicted protein.
  
0.852
B7FUC3_PHATC
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.845
B7G888_PHATC
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.823
B7G661_PHATC
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.771
B7G052_PHATC
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.732
B7S469_PHATC
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.732
B7FYY2_PHATC
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.727
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.