STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHATR_21116Predicted protein. (418 aa)    
Predicted Functional Partners:
B7FV31_PHATC
Predicted protein.
 
 0.999
B7GBF1_PHATC
Predicted protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.996
PHATR_36913
Predicted protein.
  
  
 0.983
B7GEG8_PHATC
CPS III, carbamoyl-phosphate synthase mitochindrial.
 
 
 0.977
PURA_PHATC
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity). Belongs to the adenylosuccinate synthetase family.
  
 
 0.964
B7FT50_PHATC
Predicted protein.
   
 0.950
B7G0P4_PHATC
Predicted protein.
  
  
 0.940
AAT_1
Aspartate transaminase.
   
 
 0.939
AAT_2
Aspartate aminotransferase.
   
 
 0.939
B7G5H9_PHATC
Aspartokinase; Belongs to the aspartokinase family.
  
 
 0.930
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.