STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UGDH1UDP-glucose 6-dehydrogenase. (475 aa)    
Predicted Functional Partners:
B7GEG7_PHATC
Nad-dependent epimerase/dehydratase.
 0.996
B7FZ25_PHATC
Udp-n-acetylglucosamine diphosphorylase.
     
 0.963
B7GCG1_PHATC
Precursor of phosphorylase udp-glucose diphosphorylase.
     
 0.963
GALE1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.926
SQD1
UDP-sulfoquinovose synthase, plastid.
  
 
 0.926
B7FWF3_PHATC
Nad-dependent epimerase/dehydratase.
 
 
 0.926
B7FYA7_PHATC
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.926
B7FXN9_PHATC
Nad-dependent epimerase/dehydratase.
 
 0.909
SQD2
Glycosyl transferase, group 1.
 
  
 0.805
B7G2N7_PHATC
Predicted protein.
  
  
 0.761
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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