STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHATR_33633Predicted protein. (818 aa)    
Predicted Functional Partners:
B7G298_PHATC
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
 
     0.881
PHATR_13384
Predicted protein.
   
 
 0.770
B7FQJ9_PHATC
Predicted protein.
  
  
 0.765
B7G0L5_PHATC
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.733
AroB
3-dehydroquinate synthase.
 
    
 0.711
B7G8Q3_PHATC
Predicted protein.
   
 0.709
SMC2
Structural maintenance of chromosomes protein.
   
 
 0.686
PHATR_44165
Structural maintenance of chromosomes protein.
   
 
 0.684
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.662
B7G0X0_PHATC
Predicted protein.
   
 
 0.654
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.