STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FNW0_PHATCPredicted protein. (623 aa)    
Predicted Functional Partners:
LUT1-1
Lutein deficient 1-like protein; Belongs to the cytochrome P450 family.
 
  
 
 0.907
LUT1-2
Lutein deficient 1-like protein; Belongs to the cytochrome P450 family.
 
  
 
 0.906
B7FVN0_PHATC
Predicted protein.
 
      0.895
B7FRM6_PHATC
Predicted protein.
 
 0.805
DRE2_PHATC
Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the cytosolic Fe-S scaffold complex. Electrons are transferred from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Together with the diflavin oxidoreductase, also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RN [...]
    
 0.687
B7G0L4_PHATC
Predicted protein.
  
 
 0.684
B7FXQ3_PHATC
Predicted protein.
  
  
 0.620
PHATR_10518
Predicted protein.
  
  
 0.524
B7FV82_PHATC
Predicted protein.
  
     0.515
B7G6P4_PHATC
Predicted protein.
  
 0.513
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.