STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FP72_PHATCDNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1423 aa)    
Predicted Functional Partners:
Mlh1
Mutl-like protein 1.
 
 0.970
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.954
MSH5
Muts-like protein 5.
  
0.932
B7FWI1_PHATC
Predicted protein.
  
0.926
B7G5N0_PHATC
Predicted protein.
 
 0.894
B7G4A8_PHATC
Predicted protein.
   
 
 0.861
PHATR_46734
Predicted protein.
   
 0.832
B7G6C2_PHATC
Predicted protein.
   
 0.832
B7G3J7_PHATC
Formamidase-like protein.
  
 0.804
B7G4I3_PHATC
Predicted protein.
  
 0.804
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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