STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FP97_PHATCPredicted protein. (506 aa)    
Predicted Functional Partners:
B7GBX9_PHATC
Predicted protein.
    
 0.757
NURF-55
Chromatin assembly factor subunit c.
    
 0.675
B7FY78_PHATC
Predicted protein.
    
 0.669
B7FSQ3_PHATC
Predicted protein.
   
 0.660
B7G638_PHATC
Predicted protein.
   
 0.645
B7GD99_PHATC
Predicted protein.
   
 0.645
rps2
30S ribosomal protein S2, chloroplastic.
   
  0.631
rps12
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity).
    
 0.621
B7FPS3_PHATC
Predicted protein; Belongs to the universal ribosomal protein uS5 family.
   
  0.618
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
    
  0.616
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
Server load: low (24%) [HD]